dbCAN-seq: a database of CAZyme sequence and annotation

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02082
Location and strand information: 12197 - 13114 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide transport system permease protein OppB

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02083
Location and strand information: 13127 - 14170 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide transport system permease protein OppC

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02084
Location and strand information: 14186 - 15193 (+)
Family: 3.A.1.5.2
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppD

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02085
Location and strand information: 15186 - 16166 (+)
Family: 3.A.1.5.37
Protein type: TC
Protein description: Oligopeptide transport ATP-binding protein OppF

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02086
Location and strand information: 16248 - 17885 (+)
Family: 3.A.1.5.22
Protein type: TC
Protein description: Oligopeptide-binding protein OppA

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02087
Location and strand information: 17985 - 18662 (+)
Family: null
Protein type: null
Protein description: Thymidylate kinase

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02089
Location and strand information: 18983 - 19870 (+)
Family: 2.A.115.1.2
Protein type: TC
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02090
Location and strand information: 19855 - 20877 (+)
Family: null
Protein type: null
Protein description: hypothetical protein

Gene clsuter ID: MGYG000001388_36|CGC1
Gene ID: MGYG000001388_02091
Location and strand information: 20903 - 21694 (-)
Family: CE4
Protein type: CAZyme
Protein description: Peptidoglycan-N-acetylmuramic acid deacetylase PdaA
Protein isoelectric point: 7.2015
Protein molecular weight: 29094.51
NCBI Blastp with this gene.
Protein sequence: copy AA seq

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CGC gene composition diagram

Gene composition table

Substrate predicted by dbCAN-PUL is xylan download this fig

Genomic location

Protein ID	Protein Name	Type	Start	End	Strand	Signature
MGYG000001388_02082	Oligopeptide transport system permease protein OppB	TC	12197	13114	+	3.A.1.5.2
MGYG000001388_02083	Oligopeptide transport system permease protein OppC	TC	13127	14170	+	3.A.1.5.2
MGYG000001388_02084	Oligopeptide transport ATP-binding protein OppD	TC	14186	15193	+	3.A.1.5.2
MGYG000001388_02085	Oligopeptide transport ATP-binding protein OppF	TC	15186	16166	+	3.A.1.5.37
MGYG000001388_02086	Oligopeptide-binding protein OppA	TC	16248	17885	+	3.A.1.5.22
MGYG000001388_02087	Thymidylate kinase	null	17985	18662	+	Thymidylate_kin
MGYG000001388_02089	hypothetical protein	TC	18983	19870	+	2.A.115.1.2
MGYG000001388_02090	hypothetical protein	null	19855	20877	+	No domain
MGYG000001388_02091	Peptidoglycan-N-acetylmuramic acid deacetylase PdaA	CAZyme	20903	21694	-	CE4
Protein ID	Protein Name	Type	Start	End	Strand	Signature